Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846305.1_cds_XP_016509588.1_22509
CDS Infomation

[gene=LOC107827045] [db_xref=GeneID:107827045] [protein=protein disulfide isomerase-like 1-4] [protein_id=XP_016509588.1] [location=complement(join(4582..4749,4859..4915,5391..5525,5645..5725,5812..5880,6380..6454,6544..6668,6839..6982,7061..7226,8018..8147,8817..9364))] [gbkey=CDS]
Sequence

ATGGCGATGAAGAAATATCTAATTCTCTCGATTCTTCTACTCAGTCTCATTTGCTTCAAC
ACGGCGTCGTCTTTACACAGCAAAAATATTGAAGAAGAAGAAGAAGATCTCAGTTTCCTC
GAAGAAGAGGATTCTGCTGCTGATGCTCATTCAGATTCCAATCCGTACGGAGACCACCAC
GATTACGAGAACTACGATGATCTTGAGGAGGATTCCGATGCTTCGGATCAAGGATACGAC
TCGTACGAGCCGCCGGCAGTGGATGAGAAGGATGTTGCGGTACTGAAGGAAGGGAATTTC
AGTGAGTTTATTGCGAAGAATAAACATGTTATGGTTGAGTTCTACGCGCCTTGGTGCGGT
CACTGCCAGGCACTCGCGCCGGAGTATGCTGCGGCCGCGACGGAGCTGAAAGGAGAGAAT
GTTCTGCTTGCTAAAGTGGATGCTACTGAGGAAGCTGAGCTGGCTCAGAAGTATGATGTT
CAAGGCTATCCCGCTGTTTTCTTCTTCATTGATGGCCTTCACAAGCCTTACAATGGTGAA
AGAAACAAGGATGCTATTGTTTCATGGATAAAAAAGAAGACTGGACCTGCTCTATCAAAT
ATAACGACGGCAGAGGAGGCAGAACGTGTCTTGAAAGATGAGAAAAAAGTAGTGTTGGCT
TATTTGAATGATTTAGTGGGTGATAAAAGTGAAGAGCTTGCTGCAGCTGCTGCACTAGAA
GATGATGTCAACTTCTATCAGACTGCCAGTCCAGATGTGGCAAAGCTCTTCCACATTGAT
TCTCAAGCCAAACGTCCAGCTCTTGTCATAATTAAGAAGGAAGCCGAAAATATCAACCAC
TTCGGCGGTGAGTTTACCAAGTCAGCAATAGCTGAGTTTGTTTTTCAGAATAAACTTCCT
CTTGTCACCTATTTTACTCGGGAAAGTGCCTCAGAGATATTTGAAAATGCCATTAAGAAG
CAGGTGATCATTAAGCTAACAATAGCAGAAAGTCTTTCGTGTTTTTTTTTTTCAAAAACC
TTGCAGCTTATCTCTGTGTATGTTGAAATCGACAATGAAGATGTTGGAAAACCAGTTTCA
GAGTACTTTGGCGTTAGCGGTGATGCCCCAAGAGTTCTCGCATATACAGGAAATGAAGAT
GGGAGGAAGTTTGTACTGGAAGGTGAAATAACCTTGGACAGTGTCAAGTCATTCGGGGAG
AAGTTTTTGGAAGACAATCTAAAACCCTTTTATAAATCTGACCCAATCCCTGAGACTAAT
GACGGGGATGTTAAAGTTGTAGTTGGCAATAACTTTGACGAAATTGTTCTAGATGAATCA
AAAGATGTTCTTCTTGAGATATATGCTCCTTGGTGTGGACATTGTCAATCACTAGAACCC
ATATACAACAAGCTTGGCAAGCATTTAAGAGGCATCGACTCCCTTGTTGTTGCCAAGATG
GATGGTACAACAAATGAGCATCCCCGGGCCAAGTCTGATGGATTCCCAACACTTCTGTTC
TTCCCAGCTGGCAACAAGAGCTTTGATCCAATTACTGTTGACACAGACCGTACAGTGGTG
GCCTTCTACAAATTCCTGAAAAAGCACGCATCTATCCCCTTCAAGATTCAAAAGCCGGCC
TCAACACAGAAACCTACAGAGTCTGATGCCAGTTCAAGCCCCGAGAGTACCACTAATGAT
GTTAAGGATGAACTGTGA

Peptide Sequence

PEP ID

XP_016509588.1
PEP Infomation

PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tabacum]
Sequence

MAMKKYLILSILLLSLICFNTASSLHSKNIEEEEEDLSFLEEEDSAADAHSDSNPYGDHH
DYENYDDLEEDSDASDQGYDSYEPPAVDEKDVAVLKEGNFSEFIAKNKHVMVEFYAPWCG
HCQALAPEYAAAATELKGENVLLAKVDATEEAELAQKYDVQGYPAVFFFIDGLHKPYNGE
RNKDAIVSWIKKKTGPALSNITTAEEAERVLKDEKKVVLAYLNDLVGDKSEELAAAAALE
DDVNFYQTASPDVAKLFHIDSQAKRPALVIIKKEAENINHFGGEFTKSAIAEFVFQNKLP
LVTYFTRESASEIFENAIKKQVIIKLTIAESLSCFFFSKTLQLISVYVEIDNEDVGKPVS
EYFGVSGDAPRVLAYTGNEDGRKFVLEGEITLDSVKSFGEKFLEDNLKPFYKSDPIPETN
DGDVKVVVGNNFDEIVLDESKDVLLEIYAPWCGHCQSLEPIYNKLGKHLRGIDSLVVAKM
DGTTNEHPRAKSDGFPTLLFFPAGNKSFDPITVDTDRTVVAFYKFLKKHASIPFKIQKPA
STQKPTESDASSSPESTTNDVKDEL

Transcript Sequence

Gene sequence data has not been registered.